rs17122776 chr14:22819744 A>G
- Sequence
accaagcgtatcgctcatgctgca[A/G]cagctgttgactctgaggagcaga
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXA2_HUMAN CEBPA_HUMAN TEAD3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 2.26 | -3.94 | 1.25 | 0.51 | Weak Discordant | |||
| CEBPA_HUMAN | 2.97 | n/a | 1.50 | n/a | No Hit | |||
| TEAD3_HUMAN | 2.72 | -4.94 | 2.00 | n/a | No Hit |
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Motif analysis
