ADASTRA v6.1.0
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rs171239
chr3:10739132
T
>
C
Sequence
tcttccaggggagagacaagtatt[T/C]ctgcccgcccgattccgattccca
ASB in cell types
THP-1 (acute monocytic leukemia)
liver
heart left ventricle
CUTLL1 (T-cell lymphoblastic lymphoma 1)
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(+2 others)
ASB for transcription factors
RAD21_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.71
-0.29
4.8·10
-4
1.00
1.25
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
comorbid depressive syndrome and alcohol dependence
,
longstanding arthritis
,
rheumatoid arthritis
,
sporadic creutzfeldt-jakob disease
,
taste change in healthy volunteers in response to topiramate treatment (less sweet)
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)