rs17124938 chr8:17614329 T>C

Sequence
cagtttcagtatgttttacccagc[T/C]gtctgtttcccaggatctgtactc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.45 n/a 0.011.00 2.00 -4.56 Concordant
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Motif analysis

ANDR_HUMAN Concordant
ANDR_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  body mass index (bmi),  hdl cholesterol change with statins,  homa-b,  ldl cholesterol
GTEx eQTL Artery_Aorta,  Cells_Cultured_fibroblasts,  Pancreas

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