rs17129638 chr10:112221677 T>C
- Sequence
aaagatggcaccaatctgtcattg[T/C]ataccccagaacagtgtgtctcaa
- ASB in cell types
- MSC (mesenchymal stem cells) Kasumi-1 (acute myeloblastic leukemia)
- ASB for transcription factors
- CEBPB_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 0.51 | 1.68 | 1.21 | 2.99 | Concordant | |||
| CEBPA_HUMAN | -4.07 | 2.30 | 1.50 | 4.10 | Concordant |
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Motif analysis
Genetic associations
GRASP adiponectin levels, hdl cholesterol, parkinsons disease (pd) (age of onset), total cholesterol, triglycerides