rs17136670 chr7:16805376 G>A
- Sequence
gcagattgcctttatttacttgaa[G/A]acacacaagagatgattcacaatt
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma) A549 (lung carcinoma) 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- FOXA1_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.93 | 0.13 | 1.61 | -0.62 | Weak Concordant | |||
| FOXA2_HUMAN | 1.14 | -0.88 | 2.22 | n/a | No Hit |
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Motif analysis
