rs17140078 chr5:116543543 C>T
- Sequence
cttatctctaacatctagacctgt[C/T]atcttttagaataaggccaagaat
- ASB in cell types
- MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | 1.95 | -0.79 | 2.00 | 7.32 | Discordant |
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Motif analysis
