rs17142157 chr6:6393340 G>A
- Sequence
atgaatgaaattctcactcatctc[G/A]aaagtgtacattctctgctttctc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZNF24_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZNF24_HUMAN | 1.93 | n/a | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, asthma, autism with verbal ability, fasting insulin, height, infant head circumference, microalbuminuria, rheumatoid arthritis, spine bone mineral density (bmd), urinary albumin-to-creatinine ratio, variant creutzfeldt-jakob disease