rs17143188 chr11:82034584 A>G
- Sequence
ttcaggaacataattgctttgttc[A/G]atcaaagtgtctccaagtgctgtg
- ASB in cell types
- neural cell
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.67 | -2.54 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, mitral annular calcium, obesity with early age of onset (age >2), serum creatinine