rs17146413 chr11:64870569 C>T

Sequence
actgcaagtagaaacactaccctg[C/T]tgatgctgatacagctttcatggg
ASB in cell types
HAEC (human aortic endothelial cells)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 3.34 n/a 2.9·10-41.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  hdl cholesterol change with statins,  major depressive disorder
GTEx eQTL Artery_Tibial,  Brain_Cerebellum,  Brain_Putamen_basal_ganglia,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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