rs17152350 chr7:105934645 G>A

Sequence
tgtggtttccgctataggtaaggg[G/A]caaactcaccgtttctggcctgca
ASB in cell types
GM12892 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.41 0.07 6.6·10-31.00 1.05 n/a n/a
CTCF_HUMAN 0.89 0.22 0.031.00 1.34 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP childhood acute lymphoblastic leukemia ldl cholesterol triglycerides

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