rs17153181 chr8:8520615 T>C

Sequence
ctccaggactgatttcctcgactt[T/C]cattctagaccaggggtgtccaat
ASB in cell types
THP-1 (acute monocytic leukemia)
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.77 -0.35 3.3·10-41.00 1.88 4.28 Discordant
Items per page:
1 – 1 of 1

Motif analysis

SPI1_HUMAN Discordant
SPI1_HUMAN pic

Genetic associations

GRASP bipolar disorder,  diastolic blood pressure (dbp),  systolic blood pressure (sbp)
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Cerebellum,  Brain_Nucleus_accumbens_basal_ganglia,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Uterus,  Whole_Blood

Download