rs17154476 chr5:126368244 T>C

Sequence
tgaccacctggtctttgttttaat[T/C]tgcacacacacaaatgaaagctgt
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.86 -5.08 6.5·10-31.00 2.00 0.60 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP birth weight,  chronic kidney disease,  college completion,  fasting insulin,  hdl cholesterol change with statins,  homa-b,  homa-ir
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Nerve_Tibial

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