rs17154555 chr8:8655975 C>T
- Sequence
ggactcccagataaatgcatgaaa[C/T]gtaaatataaagagatcgtgtgtg
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.02 | 1.26 | 1.47 | 4.08 | Concordant |
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Motif analysis
