rs17155132 chr8:9040372 C>A
- Sequence
ctaaggccttaagctgacttgaga[C/A]tttccgggtggtaggaggcttctg
- ASB in cell types
- Detroit 562 (Pharyngeal squamous cell carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TF65_HUMAN SRF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -0.60 | 2.61 | 1.14 | 0.15 | Weak Concordant | |||
| SRF_HUMAN | -1.82 | 2.17 | 1.00 | n/a | No Hit |
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Motif analysis
