rs17157585 chr7:110283128 G>C
- Sequence
aattgcaaggatctttagagaaca[G/C]actcctttgtcactagtccctagg
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.91 | 0.02 | 1.42 | 1.84 | Weak Discordant | |||
| FOXA1_HUMAN | 1.43 | -0.14 | 1.38 | n/a | No Hit |
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Motif analysis
