rs17162110 chr1:26396506 T>C
- Sequence
ctggatgggtcacttcctgtcagt[T/C]accatgagcaaattgtttaatctc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- PKNX1_HUMAN MEIS2_HUMAN ILF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | n/a | 3.03 | 1.00 | 6.28 | Concordant | |||
| MEIS2_HUMAN | -1.94 | 2.34 | 1.00 | 4.91 | Concordant | |||
| ILF3_HUMAN | 1.76 | -1.51 | 1.00 | n/a | n/a |
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Motif analysis
