rs17165189 chr7:93232313 C>T
- Sequence
ctaccgccggcgtccagaagacta[C/T]agttcccagcaggcccagggaaag
- ASB in cell types
- CD14+ monocytes K562 (myelogenous leukemia) HUES64 (embryonic stem cells)
- ASB for transcription factors
- STAT1_HUMAN THA11_HUMAN SOX6_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.62 | n/a | 2.00 | -1.00 | Weak Concordant | |||
| THA11_HUMAN | 1.36 | -0.34 | 1.40 | n/a | n/a | |||
| SOX6_HUMAN | 2.47 | -2.13 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.40 | 0.99 | 1.11 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
