rs17168118 chr7:134892089 A>G

Sequence
tttggctaaagcacacattgccca[A/G]tccttagagtaaacagccaaagcc
ASB in cell types
liver
ASB for transcription factors
FOXA2_HUMAN SP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 2.54 0.28 8.9·10-41.00 1.17 n/a No Hit
SP1_HUMAN 2.70 -2.57 7.7·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol
GTEx eQTL Adipose_Subcutaneous Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Liver Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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