rs17170908 chr7:37182270 C>T
- Sequence
taacatcggtagagttttatacac[C/T]ggcagatacggtagggcagattct
- ASB in cell types
- glioblastoma cells H929 (plasma cell myeloma) hepatocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SMCA5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA5_HUMAN | 2.46 | -2.18 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, chronic kidney disease, serum creatinine, triglycerides change with statins