rs17171051 chr7:148575853 T>C
- Sequence
agagaaaaccctcaggaactagtg[T/C]gcccaaaaatggttcaaggtcaca
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte THP-1 (acute monocytic leukemia) spleen
- ASB for transcription factors
- KDM6A_HUMAN SMC3_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM6A_HUMAN | 2.40 | -1.43 | 2.00 | n/a | n/a | |||
| SMC3_HUMAN | 0.16 | 1.32 | 1.92 | n/a | n/a | |||
| CTCF_HUMAN | 0.82 | 1.11 | 1.37 | n/a | No Hit |
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