rs17171365 chr5:137344960 A>C

Sequence
gttagcttgggtaacaaaagcttt[A/C]tagaaggttcttaggcagagtctc
ASB in cell types
GM18505 (female B-cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.14 -0.13 5.4·10-31.00 1.08 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Hypothalamus

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