rs17172223 chr7:43526667 G>A
- Sequence
gtctgtgcagctcaaataattaag[G/A]cttctaaaccttcaccttcctgta
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.54 | 2.49 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP apoa1 (apolipoprotein ai), obesity with early age of onset (age >2), total cholesterol, triglycerides, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood