rs17178045 chr14:71289641 A>G
- Sequence
caggccctaggctaggccctgcag[A/G]cagaaacacaccagggcactggca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.49 | -2.27 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.56 | -1.37 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), suicide attempts in bipolar disorder, suicide attempts in bipolar disorder (females), suicide attempts in bipolar disorder (substance abuse/dependence), systolic blood pressure (sbp)
GTEx eQTL Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid