rs17181323 chr2:57046326 T>A
- Sequence
aagggcaaacactgattgtactta[T/A]aaaaggaacaaggcatgaatgaaa
- ASB in cell types
- 22RV1 (prostate carcinoma) LHSAR (prostate epithelial cells) VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN HNF4G_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.90 | -0.44 | 2.40 | n/a | No Hit | |||
| FOXA1_HUMAN | 2.04 | -0.29 | 1.61 | n/a | No Hit | |||
| HNF4G_HUMAN | 1.88 | -0.92 | 1.50 | n/a | No Hit |
Items per page:
1 – 3 of 3