rs17182728 chr2:223760238 G>A
- Sequence
acctgcctctttcgtttgagtcac[G/A]atctgctcatttagcaatccaagt
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- EP300_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 1.16 | -0.05 | 2.00 | n/a | n/a | |||
| JUN_HUMAN | 1.28 | 0.25 | 2.12 | 0.29 | Weak Discordant |
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Motif analysis
