rs17190487 chr6:84618132 G>A

Sequence
accaaaattggaaccgtttaatga[G/A]agtctgggcaattaccccatcatg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 1.91 -0.69 0.011.00 2.25 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP birth weight,  chronic kidney disease,  hdl cholesterol,  obesity with early age of onset (age >2),  refractive error,  serum creatinine
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Esophagus_Muscularis,  Nerve_Tibial

Download