rs17190940 chr5:64497590 T>C

Sequence
cgctccatctccactgactcatta[T/C]cgcattccacctcctatctgttga
ASB in cell types
iPS-derived dermal fibroblasts
ASB for transcription factors
RARA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN 2.34 -1.59 8.4·10-41.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  cystatin c in serum,  serum creatinine,  tardive dyskinesia,  tetrology of fallot,  triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Breast_Mammary_Tissue,  Minor_Salivary_Gland,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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