rs17201124 chr5:80247369 C>T
- Sequence
aatctacagcctctatacagaaaa[C/T]gagggcggaaagcaagcaatgggg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) BEAS-2B (bronchial epithelium) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- IKZF2_HUMAN ESR1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | n/a | 4.32 | 1.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.67 | -4.89 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.10 | -0.31 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3