rs17207135 chr19:53520525 C>T

Sequence
cagggcaggagaaggccgacaggg[C/T]ttccagcatttgaagattctgcca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
IKZF2_HUMAN ZBT40_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.05 -1.80 1.8·10-31.00 1.00 n/a n/a
ZBT40_HUMAN 2.04 n/a 0.031.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse Esophagus_Mucosa

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