rs172078 chr5:6713290 A>G
- Sequence
cgcaggcgcggtaaccacggcggc[A/G]gtgtctagtgaggatttgaaatcg
- ASB in cell types
- GM02630 (Fanconi anemi) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.34 | 2.07 | 1.07 | n/a | n/a | |||
| RAD21_HUMAN | n/a | 2.30 | 1.00 | n/a | n/a |
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