rs17208928 chr3:122627023 C>T
- Sequence
actgaactttcagtccacattctc[C/T]atgactacatgtaagatgttcact
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN MEF2B_HUMAN ELF1_HUMAN NFAC3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -2.47 | 2.59 | 2.50 | n/a | n/a | |||
| MEF2B_HUMAN | -2.23 | 2.61 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | n/a | 2.76 | 1.00 | n/a | No Hit | |||
| NFAC3_HUMAN | -2.75 | 2.65 | 1.00 | -2.35 | Discordant | |||
| ZN687_HUMAN | -1.83 | 2.22 | 1.00 | n/a | n/a |
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Motif analysis
