rs17215673 chr12:106178831 G>C
- Sequence
ttcccacctcagctgaggccctca[G/C]gtagctgcggtcaacagcctctgc
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN HIF3A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.41 | 1.73 | 1.35 | n/a | No Hit | |||
| HIF3A_HUMAN | n/a | 4.04 | 1.50 | 4.14 | Concordant |
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Motif analysis
