rs17215981 chr3:46082926 A>G
- Sequence
gtttgctaccctaaaccaaaaact[A/G]cttttgaccacaatgacccactgg
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.66 | 0.32 | 1.61 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, irritible bowel syndrome, lp-pla2 activity, major depressive disorder, refractive error
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Thyroid, Whole_Blood