rs17221912 chr12:15194003 G>C
- Sequence
ctccctccaaaaggatttgaatgt[G/C]agatttcacattgacagcaggaaa
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- SMRC1_HUMAN SSXT_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | -1.90 | 2.38 | 1.40 | n/a | n/a | |||
| SSXT_HUMAN | -3.24 | 3.10 | 1.00 | n/a | n/a | |||
| SMCA4_HUMAN | -0.26 | 1.93 | 1.50 | n/a | n/a |
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