rs17222360 chr12:75656910 G>A
- Sequence
ccattgcatcagcttgctgtgctc[G/A]cctggtgtctgctccttaatcaga
- ASB in cell types
- BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN JUN_HUMAN TF65_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.08 | -0.30 | 1.00 | n/a | No Hit | |||
| JUN_HUMAN | 1.21 | -0.27 | 1.21 | n/a | No Hit | |||
| TF65_HUMAN | 0.14 | 1.47 | 2.00 | n/a | No Hit | |||
| RAD21_HUMAN | 1.65 | -0.95 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid