rs17227883 chr15:67150740 C>T
- Sequence
agttgaactaatagtgaggtttgc[C/T]ggcagataagacttgagaaattgc
- ASB in cell types
- HEK293 (embryonic kidney) HUVEC-C (HUVEC, umbilical vein endothelial cells) K562 (myelogenous leukemia) HAEC (human aortic endothelial cells)
- ASB for transcription factors
- NOTC1_HUMAN TF65_HUMAN SIN3A_HUMAN PRD10_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NOTC1_HUMAN | 2.38 | n/a | 2.00 | n/a | n/a | |||
| TF65_HUMAN | 1.91 | -0.12 | 1.92 | n/a | No Hit | |||
| SIN3A_HUMAN | 2.82 | n/a | 1.00 | n/a | n/a | |||
| PRD10_HUMAN | 1.35 | 0.72 | 1.50 | n/a | n/a | |||
| RARA_HUMAN | 2.05 | -1.51 | 1.00 | n/a | No Hit |
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