rs17229285 chr2:198658398 C>T

Sequence
ttcaaaataataaacgtaactatt[C/T]cataaaaatatctcaacacagtag
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)
ASB for transcription factors
Q8IZH1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
Q8IZH1_HUMAN 1.97 -0.12 7.1·10-30.92 1.40 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI inflammatory bowel disease smoking initiation (ever regular vs never regular) smoking initiation (ever regular vs never regular) (mtag) ulcerative colitis
GRASP college completion coronary artery disease (cad) myocardial infarction (mi) ulcerative colitis years of education
Finemapping ulcerative colitis

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