rs17240498 chr13:72391169 T>C
- Sequence
ggcagtgggataatgaacagatat[T/C]atgtggcaataccgaatggagcat
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | 2.69 | n/a | 1.50 | -1.24 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP chronic kidney disease, cystatin c in serum, fasting insulin, hdl cholesterol, homa-b, homa-ir, ldl cholesterol