rs17244627 chr7:136245597 G>A
- Sequence
ttatccattcttggtgcatggcca[G/A]tccattgaaattatgacagaaaac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFIC_HUMAN IKZF1_HUMAN MEIS2_HUMAN PBX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 1.87 | 1.50 | 1.24 | Weak Concordant | |||
| IKZF1_HUMAN | -3.06 | 1.69 | 1.50 | n/a | n/a | |||
| MEIS2_HUMAN | n/a | 0.90 | 1.50 | n/a | No Hit | |||
| PBX2_HUMAN | n/a | 1.67 | 2.00 | 2.25 | Concordant |
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Motif analysis
