rs17251215 chr6:106373290 A>G
- Sequence
ctcagttcctgaagtgttaactaa[A/G]cctgttgcacctgatttccaatct
- ASB in cell types
- bronchial epithelial cells MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GRHL2_HUMAN FOS_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GRHL2_HUMAN | 3.10 | -5.17 | 1.50 | -3.24 | Concordant | |||
| FOS_HUMAN | 2.50 | -4.41 | 1.50 | n/a | No Hit |
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Motif analysis
