rs17257143 chr9:125541115 C>T
- Sequence
tcttgtatgaaaaggaataaataa[C/T]gcagatcactgtttttcagataac
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.57 | -0.21 | 1.45 | 0.60 | Weak Discordant | |||
| ANDR_HUMAN | 0.97 | -0.24 | 1.33 | -0.36 | Weak Concordant |
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Motif analysis
