rs17258759 chr12:108780679 C>A

Sequence
agagaacagtgtcttgaaccatga[C/A]cctcagtgatttgtttttaaaaca
ASB in cell types
NOMO-1 (acute monocytic leukemia)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
NOMO-1 (acute monocytic leukemia) -1.98 1.97 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  ldl cholesterol,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Liver,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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