rs17264903 chr7:36132283 C>T

Sequence
gcccccgtgtcataatggggttgt[C/T]tttccaactcttaatgtcatggtt
ASB in cell types
THP-1 (acute monocytic leukemia) GM12892 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RAD21_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.81 0.50 9.5·10-30.80 1.29 n/a n/a
STAG1_HUMAN 1.96 0.63 0.021.00 1.08 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) aortic valve calcium comorbid depressive syndrome and alcohol dependence mean bilateral hippocampal volume (excluding patients with neuropsychiatric disorders)
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Spleen Testis

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