rs17269271 chr15:58447562 G>C

Sequence
atatcatgtttgcattgttttctt[G/C]catgtgtcacttcaccacaatgct
ASB in cell types
CFPAC-1(pancreatic ductal adenocarcinoma)
ASB for transcription factors
FOXA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 1.25 -0.13 0.051.00 1.07 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  advanced age-related macular degeneration,  cystatin c in serum,  hdl cholesterol,  hdl cholesterol change with statins,  total cholesterol,  triglycerides
GTEx eQTL Pancreas

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