ADASTRA v6.1.1
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rs17272694
chr19:48872268
G
>
T
Sequence
gtggtcacgctcggaaactccgcc[G/T]tgacgttgcaaaagctggaatctc
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SMCA4_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN
-0.14
1.14
0.99
0.04
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
high light scatter reticulocyte count
,
high light scatter reticulocyte percentage of red cells
,
reticulocyte count
,
reticulocyte fraction of red cells
GTEx eQTL
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)