ADASTRA v6.1.1
Search
Browse
Annotate
Help
Downloads
About
rs17274172
chr8:129697339
C
>
G
Sequence
caggacatgaacgatatcaccgta[C/G]aacttaaggaggttgttcaacttg
ASB in cell types
K562 (myelogenous leukemia)
A549 (lung carcinoma)
PC9 (lung adenocarcinoma)
GM12892 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RAD21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
0.92
1.10
0.76
0.04
1.15
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
height
,
mitral annular calcium
,
rheumatoid arthritis
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
Download
Download page in JSON
Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)