rs17277521 chr7:21759539 C>T
- Sequence
ttctgcactaaacctccattcctg[C/T]gagggtttcctcaggtttagactt
- ASB in cell types
- breast tumor xenograft
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.75 | 1.38 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP atypical cytochrome p450 3a4 (cyp3a4) enzyme activity, diabetic retinopathy in type 2 diabetes mellitus, hdl cholesterol, mitral annular calcium, parkinsons disease