rs17279261 chr12:85768936 C>T

Sequence
aaccaagtgggacctgtctatgta[C/T]acagtgttcattagacccacgtta
ASB in cell types
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.04 -0.32 8.6·10-41.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  homa-ir,  refractive error,  total cholesterol,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous,  Esophagus_Muscularis,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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