rs17284967 chr7:16071019 A>G

Sequence
tttgattttgctactatgtaaaca[A/G]aacagttgcccagtaaaaaagttt
ASB in cell types
breast tumor xenograft
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -0.22 1.26 1.000.03 1.62 -4.28 Discordant
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Motif analysis

FOXA1_HUMAN Discordant
FOXA1_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration
GTEx eQTL Brain_Cerebellar_Hemisphere

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