rs17286954 chr5:141507862 G>T
- Sequence
ggccctgctctcactttcacaccc[G/T]cttcctagccctgaaaccagagag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells
- ASB for transcription factors
- CBP_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CBP_HUMAN | 2.81 | -0.45 | 1.75 | n/a | n/a | |||
| IKZF2_HUMAN | 1.85 | -0.65 | 1.00 | n/a | n/a |
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